Overview - Effects of cost in protein evolution

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Added id to amino acids yml file http... was committed by Michael Barton
Monday Sep 22

Commit [017157c850cca726a1fbeb0f0c1b80872e531fb3]
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Updated specing for amino acid freque... was committed by Michael Barton 12:05 PM
Commit [2626b37cb7ce3009a24ca09e07f3ce11b12070fb]
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Updated amino acid load method http:/... was committed by Michael Barton 12:05 PM
Commit [af40ff447c7767ea0d524b9bef0e0e1fcfcf71ff]
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Updated rind runner specing. Fixing t... was committed by Michael Barton
Thursday Sep 18

Commit [86385f728572e8f10eedbedb7b717e628423d91a]
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Updated rind runner to use bioruby ri... was committed by Michael Barton 04:16 PM
Commit [4cd319fd32dad03d9f79fb4c49418ea3115908bb]
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Added rind parser to config/environme... was committed by Michael Barton 04:16 PM
Commit [6771e72cc927b35bca03f4b0c4f36166b9416487]
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Added updated bioruby gem http://gith... was committed by Michael Barton 04:16 PM
Commit [24e936c958132d483c848d551b8836fa528bd0ba]
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Added script to plot amino acid cost ... was committed by Michael Barton
Tuesday Sep 16

Commit [8b4f1551180c68892023248b4eddb7c24da60b9c]
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Added csv of amino acid cost data htt... was committed by Michael Barton 07:19 PM
Commit [a8fc6d12c5823c7b0014a6c0021a8b1d680bf720]
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Created task to print cost data to fi... was committed by Michael Barton 07:19 PM
Commit [c9491c8c838a16b8b084e8a90354684f15bc8e2f]
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Changed type to name for printing of ... was committed by Michael Barton 07:19 PM
Commit [90629f510a7572ac4cfac38a6e59dbd3554075e1]
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Updated validation for new column htt... was committed by Michael Barton 07:19 PM
Commit [a342d8eb7c431d31603831e57d8048155ba7df3c]
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Renamed problematic type column to na... was committed by Michael Barton 07:19 PM
Commit [ada755c4d43b8bc31d51b917032500a0934be2be]
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Added rake tasks to load and clear am... was committed by Michael Barton 03:13 PM
Commit [758e8faf7654b09f746fcdb3bb6a938b0cb086ab]
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Added amino acid costs dataset http:/... was committed by Michael Barton 03:13 PM
Commit [b8d98870a5fc254f9186b27b1eb39b7a826d7362]
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Added presence validation http://gith... was committed by Michael Barton 03:13 PM
Commit [aff8eb89f761c155bc07492ed7e0d99c6d7177d2]
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Created acid costs migration http://g... was committed by Michael Barton 03:13 PM
Commit [70a20fde51d167182d00462e0a71c157fd901439]
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Created amino acids table http://gith... was committed by Michael Barton 03:13 PM
Commit [df3f3722e806d4f34f7aeb40c707eb119650a033]
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Updated .gitignore to ignore R plots ... was committed by Michael Barton 03:13 PM
Commit [3108849ccd8237401f4ac090c9af16771243e557]
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Created R script to estimate correlat... was committed by Michael Barton
Monday Sep 15

Commit [b3656ec869ac62a960d043f7f057bd2ed2d8f531]
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Created R script to plot data distrib... was committed by Michael Barton 06:47 PM
Commit [531c99b68998ef7f9d7788aa2de35aba02e2d534]
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Added produced data http://github.com... was committed by Michael Barton 06:47 PM
Commit [5586b2aee4f23610a5d500c8275ef4e5c346cdeb]
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Added rake task to produce gene mutat... was committed by Michael Barton 06:47 PM
Commit [2907e99a654852243c5413502dce742343180e1d]
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Added data summaries of each gene mut... was committed by Michael Barton 06:46 PM
Commit [271af867307f60e55209d83c0c566143b9bbe0ae]
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Added updated rustat version http://g... was committed by Michael Barton 06:46 PM
Commit [0aceb24f64b69d1421ec2da8234d96ec64187b3a]
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Added two rake tasks to generate summ... was committed by Michael Barton 06:46 PM
Commit [73f480f4655fca6d9c54452b8349dcfa77917169]
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Added acts as summary to gene mutatio... was committed by Michael Barton 06:45 PM
Commit [d12d76e9c4f8fd89c55cd28fdbd0f05e7ae1fcb8]
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Added updated rustat version http://g... was committed by Michael Barton 06:45 PM
Commit [8b1d2f8c52eddf7c9a701810391fd73a59907b80]
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~~Auto generated HTML representation of data~~ was updated by Michael Barton 01:05 PM
#6 / Website front end / ✓resolved
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Added R script to plot gene alignment... was committed by Michael Barton
Saturday Sep 13

Commit [157752988bf43808ee38f53747f4dbc05ae49165]
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Added r script to plot gene density h... was committed by Michael Barton 08:01 PM
Commit [e1979d4f1639ec97423e82e3f87da3dba70a8a8e]
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Added generated data set http://githu... was committed by Michael Barton
Wednesday Sep 10

Commit [884e7c5a1e578d8cf5d11be35b6d8ae7e9ebc39e]
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Created rake method to generate gene ... was committed by Michael Barton 03:16 PM
Commit [375a04c22a55d712ad9bc59c099625fdfbb77efb]
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Switch AminoAcidFrequencies specing t... was committed by Michael Barton
Monday Sep 08

Commit [cd93ea88a296e97c6fe6f3baa9f170e3849d7bca]
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Swtich RindRunner to use fixtures. Al... was committed by Michael Barton 01:50 PM
Commit [bf482c1ede89d1742114a0d0344488c9c7708103]
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Created site mutation fixtures http:/... was committed by Michael Barton 01:49 PM
Commit [dde2c067e32d734958780d31c61e6daea8909718]
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Added gene mutations fixture http://g... was committed by Michael Barton 01:49 PM
Commit [1131ddd3532d83d651adf3fdd68e2883650e956f]
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Created fixtures for amino acids http... was committed by Michael Barton 01:49 PM
Commit [19232388e812528aa02edaab2372631d1bb37610]
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Created generic method to clear all t... was committed by Michael Barton 01:49 PM
Commit [e2f8924baac82a8e92b8b3ba4f634d0b70f097fe]
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Removed loader methods from spec help... was committed by Michael Barton 01:49 PM
Commit [832fe5bcb85bbde1611303fd5622dc10d7baaa0a]
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Merge branch 'master' into fixtures h... was committed by Michael Barton 01:49 PM
Commit [6032419f9c5cc0786fc534f6bfc737963aa49a58]
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Added before all statement to each sp... was committed by Michael Barton 01:49 PM
Commit [5e26568d50c3b851d4cba39f6b55cbe5caac31c7]
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Replaced true/false values in alignme... was committed by Michael Barton 01:49 PM
Commit [22b18b9d141d59cdf26e9367cd00798410fb8754]
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Created own fixtures method, to bypas... was committed by Michael Barton 01:49 PM
Commit [862531ac816b11229743ee2cb6a986f278d60a3a]
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Removed load gene method http://githu... was committed by Michael Barton 01:48 PM
Commit [abc0125a13a2b6bee8e41221ad120d8f688975b8]
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Removed helper loading methods http:/... was committed by Michael Barton 01:48 PM
Commit [da396e750c16f56e6deb69d4edc8d7896f82779a]
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Removed before/after statements from ... was committed by Michael Barton 01:48 PM
Commit [00f54a53b892e4071818a6c4828f29904353e1b5]
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Removed before/after statements from ... was committed by Michael Barton 01:48 PM
Commit [839af6c1de742de35346867fc6f513ba172332de]
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Removed before/after statements from ... was committed by Michael Barton 01:48 PM
Commit [9b9b31054fbe37d85f7137ce51cad7e051627ef7]
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Added factory for alignment http://gi... was committed by Michael Barton 01:48 PM
Commit [c639f896c10b148259b6cd08183109dff4d5592f]
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Michaelbarton Effects of cost in protein evolution

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