Changesets - Effects of cost in protein evolution

Type	To find
responsible:me	tickets assigned to you
tagged:"@high"	tickets tagged @high
milestone:next	tickets in the upcoming milestone
state:invalid	tickets with the state invalid
created:"last week"	tickets created last week
sort:number, importance, updated	tickets sorted by #, importance or updated
Combine keywords for powerful searching.
Use advanced searching »

Added correlation_by_gene model http:... was committed by Michael Barton

Thursday Oct 09

Commit [2aa0bb392b2ccfe680a5bd9f5568c9d89c1a69a8]

Active record helper to pull data fro... was committed by Michael Barton 11:08 AM

Commit [c649aa8f30f44d78abbf6a1a0ae886da943ed9de]

Created R script to plot site mutatio... was committed by Michael Barton 10:32 AM

Commit [c175ca1393b9ca28cf0d9091414815a13d819fdc]

Removed whitespace http://github.com/... was committed by Michael Barton 10:31 AM

Commit [70b7ccb16f348f7efd798e03fed2681249d3269d]

Added script to plot densitiy of codo... was committed by Michael Barton 10:29 AM

Commit [63ff48384dea4d50aa88a21e52a22701d2ced028]

Added r script to plot gene cost dens... was committed by Michael Barton 10:28 AM

Commit [6f40b37c8c7a2473cdccfc138b6b1d46f47190ba]

Average protein cost SQL file now inc... was committed by Michael Barton 10:26 AM

Commit [5b013ef8d72bd08b66aae78d5330871949c1a4bb]

Created rake task to print sitewise m... was committed by Michael Barton 10:23 AM

Commit [7323a104eb49038475f443ceb58f8a860472e593]

Created SQL file to print sitewise mu... was committed by Michael Barton 10:21 AM

Commit [8909334d9227d2455657a82d465d9211c6af94ad]

Concat cost and environment together ... was committed by Michael Barton

Monday Oct 06

Commit [8d56877c0ff5d48d37f505874615db4e8aa53815]

Ignore files in data directories http... was committed by Michael Barton

Thursday Oct 02

Commit [29a24f7e9de03b6db491994c3b660bd3d8e1d0d0]

Updated specing for alignment codon c... was committed by Michael Barton

Sunday Sep 28

Commit [c0eb5a759746feac82dcfd3d4375cce9343641c7]

Removed variance references from alig... was committed by Michael Barton 12:44 PM

Commit [c545fe152a65d01fd4df23f6a6f96f4f728d25e3]

Removed variance column from alignmen... was committed by Michael Barton 12:43 PM

Commit [29ac6b62a27223762b0b7c6fc99e7853487e13bb]

Added rake task to load alignment cod... was committed by Michael Barton

Thursday Sep 25

Commit [aa98a47a3ec6b63bdaa4bc8423eb5143815a3107]

Added starfish loader for alignment c... was committed by Michael Barton 02:39 PM

Commit [f79eb7d681faea48a464a4d43b59087d9c407bc3]

Updated alignment codon costs specing... was committed by Michael Barton 01:48 PM

Commit [23f5f18a56a0672142a4374ab993a6289547f5a5]

Fixed table associations http://githu... was committed by Michael Barton 01:48 PM

Commit [d7a04b7f226810ec36d68c52d3a7cc2d15ff5280]

Updated rind runner spec for fixture ... was committed by Michael Barton 12:16 PM

Commit [ecab6efdb126d12e5527b4ad6717ad264a66280f]

Updated directories in fixtures gener... was committed by Michael Barton 12:16 PM

Commit [19da7b7233e89954b89c6648cdcc7d28605a0860]

Moved fixtures generator from helpers... was committed by Michael Barton 12:15 PM

Commit [134629a54bcb0c2df0188e49c01e97bb72e8ef01]

Created a new set of fixtures using g... was committed by Michael Barton 11:29 AM

Commit [9cec852a4e79bb9b7856aa96cfe6ec1b74464464]

Created fixtures generator http://git... was committed by Michael Barton 11:29 AM

Commit [72b8d33d0f3a415c205ff7f5ff89bb155f52e8e1]

Merge branch 'master' of git@github.c... was committed by Michael Barton

Wednesday Sep 24

Commit [5c4cc3651887dfeba6a6cf435f167a1757cff210]

Added additional fixture yaml files h... was committed by Michael Barton 06:23 PM

Commit [95e1827f0b313c109119e79e95738f1246a6902a]

Updated model relationship keys http:... was committed by Michael Barton 06:23 PM

Commit [9ae5937cded5729ff5789d4141e3659047fd5cbc]

Added specing for alignment codon cos... was committed by Michael Barton 06:22 PM

Commit [41d0613ab7b98f28bf9bd69a6ba6e8f853abd617]

Added alignment codon cost migration ... was committed by Michael Barton 06:22 PM

Commit [541acb394190b214b5cde76b96750ffc8a8043b9]

Created model for estimating alignmen... was committed by Michael Barton 06:21 PM

Commit [002f4bcd1e657bd40d1b0f646c42bfb5cdf47567]

Updated rake file to load updated ami... was committed by Michael Barton

Monday Sep 22

Commit [a8798f648a2ee7bf052008e953f8838ae000bfaa]

Merged all amino acid costs into a si... was committed by Michael Barton 06:38 PM

Commit [a4f8cef465e2c958baadb918f7a1de6440906e25]

Added rake tasks to load cost type da... was committed by Michael Barton 06:03 PM

Commit [9494653732a6c6be290111b2bbd95238bfa17a04]

Added data for different cost types h... was committed by Michael Barton 06:02 PM

Commit [a0091c6638b9787def7be9c56652e4dfd859bfa9]

Added yaml data for different conditi... was committed by Michael Barton 05:58 PM

Commit [a9a777d85cb3a88da95210cea1b4b32747b1d66f]

Updated amino acid cost model to refl... was committed by Michael Barton 05:47 PM

Commit [fa202e8711a585198dbe9f27b1992f9048200e15]

Created CostTypes model http://github... was committed by Michael Barton 05:42 PM

Commit [051def7ca57172f0edca9d323668656e39c92407]

Added condition model http://github.c... was committed by Michael Barton 05:42 PM

Commit [6382d307a646c168e86c955f04064f1d6def5fcb]

Move amino acid costs migration from ... was committed by Michael Barton 05:41 PM

Commit [afe5c782c0e59f984606eb2608e0ed01054c4da3]

Added a migration to create a cost ty... was committed by Michael Barton 05:40 PM

Commit [5603eebe290cd761e840fb86fe83c9e1fb7f724b]

Added a migration to create a conditi... was committed by Michael Barton 05:40 PM

Commit [830dfb93f10d93dec3b8be6b4cda5b5ca7ae3b63]

Added id to amino acids yml file http... was committed by Michael Barton 12:02 PM

Commit [017157c850cca726a1fbeb0f0c1b80872e531fb3]

Updated specing for amino acid freque... was committed by Michael Barton

Thursday Sep 18

Commit [2626b37cb7ce3009a24ca09e07f3ce11b12070fb]

Updated amino acid load method http:/... was committed by Michael Barton 04:33 PM

Commit [af40ff447c7767ea0d524b9bef0e0e1fcfcf71ff]

Updated rind runner specing. Fixing t... was committed by Michael Barton 04:15 PM

Commit [86385f728572e8f10eedbedb7b717e628423d91a]

Updated rind runner to use bioruby ri... was committed by Michael Barton 04:01 PM

Commit [4cd319fd32dad03d9f79fb4c49418ea3115908bb]

Added rind parser to config/environme... was committed by Michael Barton 03:57 PM

Commit [6771e72cc927b35bca03f4b0c4f36166b9416487]

Added updated bioruby gem http://gith... was committed by Michael Barton 03:53 PM

Commit [24e936c958132d483c848d551b8836fa528bd0ba]

Added script to plot amino acid cost ... was committed by Michael Barton

Tuesday Sep 16

Commit [8b4f1551180c68892023248b4eddb7c24da60b9c]

Added csv of amino acid cost data htt... was committed by Michael Barton 07:18 PM

Commit [a8fc6d12c5823c7b0014a6c0021a8b1d680bf720]

Created task to print cost data to fi... was committed by Michael Barton 07:17 PM

Commit [c9491c8c838a16b8b084e8a90354684f15bc8e2f]

Changed type to name for printing of ... was committed by Michael Barton 07:17 PM

Commit [90629f510a7572ac4cfac38a6e59dbd3554075e1]

Updated validation for new column htt... was committed by Michael Barton 07:16 PM

Commit [a342d8eb7c431d31603831e57d8048155ba7df3c]

Renamed problematic type column to na... was committed by Michael Barton 07:14 PM

Commit [ada755c4d43b8bc31d51b917032500a0934be2be]

Added rake tasks to load and clear am... was committed by Michael Barton 03:19 PM

Commit [758e8faf7654b09f746fcdb3bb6a938b0cb086ab]

Added amino acid costs dataset http:/... was committed by Michael Barton 03:18 PM

Commit [b8d98870a5fc254f9186b27b1eb39b7a826d7362]

Added presence validation http://gith... was committed by Michael Barton 03:18 PM

Commit [aff8eb89f761c155bc07492ed7e0d99c6d7177d2]

Created acid costs migration http://g... was committed by Michael Barton 02:03 PM

Commit [70a20fde51d167182d00462e0a71c157fd901439]

Created amino acids table http://gith... was committed by Michael Barton 02:03 PM

Commit [df3f3722e806d4f34f7aeb40c707eb119650a033]

Updated .gitignore to ignore R plots ... was committed by Michael Barton 01:21 PM

Commit [3108849ccd8237401f4ac090c9af16771243e557]

Created R script to estimate correlat... was committed by Michael Barton

Monday Sep 15

Commit [b3656ec869ac62a960d043f7f057bd2ed2d8f531]

Michaelbarton Effects of cost in protein evolution

Create your profile

Michaelbarton Effects of cost in protein evolution

Keyword searching

Create your profile